Bifalgorithm post · Latest research covid · ARTICLE IN PRESS
Gene Enrichment
Gene Enrichment (Latest research covid · ARTICLE IN PRESS) — "To address the putative protective mechanisms of the ADCC mAb 5SB12 against SARS-CoV-2 infection,…
Ideas in this flowchart
- ADCC mAb 5SB12 may protect against SARS-CoV-2 infection through transcriptional, immune, and protein-modification mechanisms.
- Functional enrichment analysis was conducted to investigate the putative protective mechanisms of 5SB12.
- Comparison of infected −/− and −/+ samples showed enrichment of “Regulation of interleukin-12 production” among upregulated genes.
- Infected samples pretreated with 5SB12 showed enrichment of “Regulation of viral transcription” and “Negative regulation of viral transcription.”
- The upregulated genes Trim13 and Zfp36 were included in the enriched viral-transcription gene sets.
- Negative regulation of viral transcription may help prevent further viral replication inside host cells.
- The “Monocyte activation” gene set was enriched in the analyzed samples.
- Gene sets involving protein modification were also enriched.
- Enriched protein-modification terms included “Protein deglycosylation,” “Protein demannosylation,” and “Endoplasmic reticulum mannose trimming.”
- 5SB12 pretreatment was associated with contrasting changes in NK-cell receptor genes.
- Klrk1, which encodes an activating NK-cell receptor, was upregulated in the +/+ treatment group.
- Tigit, which inhibits NK-cell cytotoxic activity through direct inhibitory signals, was significantly downregulated after 5SB12 pretreatment.